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  1. No Access

    Article

    Presence of onco-fetal neighborhoods in hepatocellular carcinoma is associated with relapse and response to immunotherapy

    Onco-fetal reprogramming of the tumor ecosystem induces fetal developmental signatures in the tumor microenvironment, leading to immunosuppressive features. Here, we employed single-cell RNA sequencing, spatia...

    Ziyi Li, Rhea Pai, Saurabh Gupta, Jennifer Currenti, Wei Guo in Nature Cancer (2024)

  2. Article

    Open Access

    An invasive zone in human liver cancer identified by Stereo-seq promotes hepatocyte–tumor cell crosstalk, local immunosuppression and tumor progression

    Dissecting and understanding the cancer ecosystem, especially that around the tumor margins, which have strong implications for tumor cell infiltration and invasion, are essential for exploring the mechanisms ...

    Liang Wu, Jiayan Yan, Yinqi Bai, Feiyu Chen, Xuanxuan Zou, Jiangshan Xu in Cell Research (2023)

  3. Article

    Open Access

    Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques

    The cynomolgus and Chinese rhesus macaques are used as animal models in biomedical research. Yan et al. sequence their genomes and compare the sequences to that of the Indian rhesus macaque, providing a genetic f...

    Guangmei Yan, Guojie Zhang, **aodong Fang, Yanfeng Zhang, Cai Li in Nature Biotechnology (2011)

  4. No Access

    Article

    The genome of the mesopolyploid crop species Brassica rapa

    The Brassica rapa Genome Sequencing Project Consortium reports the draft genome of the B. rapa accession Chiifu-401-42, an inbred Chinese cabbage line. The B. rapa genome should provide a useful reference genome ...

    **aowu Wang, Hanzhong Wang, Jun Wang, Rifei Sun, Jian Wu, Shengyi Liu in Nature Genetics (2011)

  5. Article

    Erratum: The sequence and de novo assembly of the giant panda genome

    Nature 463, 311–317 (2010) In this Article, the Latin species name of the giant panda was written incorrectly as Ailuropoda melanoleura. The correct name is Ailuropoda melanoleuca.

    Ruiqiang Li, Wei Fan, Geng Tian, Hongmei Zhu, Lin He, **g Cai, Quanfei Huang in Nature (2010)

  6. Article

    Open Access

    The sequence and de novo assembly of the giant panda genome

    Using next-generation sequencing technology alone, we have successfully generated and assembled a draft sequence of the giant panda genome. The assembled contigs (2.25 gigabases (Gb)) cover approximately 94% o...

    Ruiqiang Li, Wei Fan, Geng Tian, Hongmei Zhu, Lin He, **g Cai, Quanfei Huang in Nature (2010)

  7. No Access

    Article

    The genome of the cucumber, Cucumis sativus L.

    Jun Wang and colleagues report the genome sequence of the cucumber. The cucumber genome is the seventh plant genome sequence to be reported and was assembled with a combination of traditional Sanger and next-g...

    Sanwen Huang, Ruiqiang Li, Zhonghua Zhang, Li Li, **ngfang Gu, Wei Fan in Nature Genetics (2009)